Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhgb5Q91XX5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Mir5133-201ENSMUST00000174955 77 ntBASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb5Q91XX5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb5Q91XX5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 AA386476-201ENSMUST00000098781 1665 ntBASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Gm27011-201ENSMUST00000182352 972 ntBASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb5Q91XX5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb5Q91XX5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhgb5Q91XX5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhgb5Q91XX5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb5Q91XX5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb5Q91XX5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb5Q91XX5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb5Q91XX5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb5Q91XX5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhgb5Q91XX5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhgb5Q91XX5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb5Q91XX5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 145.9 ms