Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Gm44487-201ENSMUST00000205145 325 ntBASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdhgc3Q91XX1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc3Q91XX1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.29■□□□□ 0.52
Pcdhgc3Q91XX1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgc3Q91XX1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc3Q91XX1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhgc3Q91XX1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc3Q91XX1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms