Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trex1Q91XB0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trex1Q91XB0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trex1Q91XB0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Trex1Q91XB0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.44■■□□□ 1.18
Trex1Q91XB0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.44■■□□□ 1.18
Trex1Q91XB0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trex1Q91XB0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Trex1Q91XB0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Trex1Q91XB0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trex1Q91XB0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trex1Q91XB0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trex1Q91XB0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trex1Q91XB0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trex1Q91XB0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trex1Q91XB0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.39■■□□□ 1.18
Trex1Q91XB0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trex1Q91XB0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trex1Q91XB0 Gm6420-201ENSMUST00000193885 723 ntBASIC22.39■■□□□ 1.17
Trex1Q91XB0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.39■■□□□ 1.17
Trex1Q91XB0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.39■■□□□ 1.17
Trex1Q91XB0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Trex1Q91XB0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trex1Q91XB0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.39■■□□□ 1.17
Trex1Q91XB0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.38■■□□□ 1.17
Trex1Q91XB0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.38■■□□□ 1.17
Trex1Q91XB0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trex1Q91XB0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trex1Q91XB0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.37■■□□□ 1.17
Trex1Q91XB0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.37■■□□□ 1.17
Trex1Q91XB0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Gm13534-201ENSMUST00000121169 513 ntBASIC22.37■■□□□ 1.17
Trex1Q91XB0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trex1Q91XB0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trex1Q91XB0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trex1Q91XB0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trex1Q91XB0 Gm12441-201ENSMUST00000121806 588 ntBASIC22.36■■□□□ 1.17
Trex1Q91XB0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trex1Q91XB0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.36■■□□□ 1.17
Trex1Q91XB0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Trex1Q91XB0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trex1Q91XB0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trex1Q91XB0 Nespas-201ENSMUST00000143738 1083 ntBASIC22.35■■□□□ 1.17
Trex1Q91XB0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Gm13148-201ENSMUST00000118892 745 ntBASIC22.34■■□□□ 1.17
Trex1Q91XB0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Gm6365-201ENSMUST00000054711 744 ntBASIC22.34■■□□□ 1.17
Trex1Q91XB0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.34■■□□□ 1.17
Trex1Q91XB0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trex1Q91XB0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms