Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Odf4Q8VI88 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.25■□□□□ 0.35
Odf4Q8VI88 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Odf4Q8VI88 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Odf4Q8VI88 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Odf4Q8VI88 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Odf4Q8VI88 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Odf4Q8VI88 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.24■□□□□ 0.35
Odf4Q8VI88 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.24■□□□□ 0.35
Odf4Q8VI88 Rarb-207ENSMUST00000225921 2756 ntBASIC17.24■□□□□ 0.35
Odf4Q8VI88 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.24■□□□□ 0.35
Odf4Q8VI88 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Odf4Q8VI88 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Odf4Q8VI88 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.22■□□□□ 0.35
Odf4Q8VI88 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Gm43017-201ENSMUST00000198296 752 ntBASIC17.22■□□□□ 0.35
Odf4Q8VI88 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.22■□□□□ 0.35
Odf4Q8VI88 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Odf4Q8VI88 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Gm8493-201ENSMUST00000196881 489 ntBASIC17.21■□□□□ 0.35
Odf4Q8VI88 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Odf4Q8VI88 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.21■□□□□ 0.34
Odf4Q8VI88 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Odf4Q8VI88 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms