Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkd2Q8VE28 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Gm12251-201ENSMUST00000117893 792 ntBASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Gm26833-201ENSMUST00000180899 440 ntBASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Spcs1-204ENSMUST00000226782 949 ntBASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nkd2Q8VE28 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkd2Q8VE28 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkd2Q8VE28 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkd2Q8VE28 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Nkd2Q8VE28 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkd2Q8VE28 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkd2Q8VE28 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkd2Q8VE28 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkd2Q8VE28 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkd2Q8VE28 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkd2Q8VE28 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkd2Q8VE28 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.63■□□□□ 0.41
Nkd2Q8VE28 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Gm43060-201ENSMUST00000200621 289 ntBASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Gm10493-201ENSMUST00000097270 612 ntBASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkd2Q8VE28 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms