Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx39aQ8VDW0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx39aQ8VDW0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx39aQ8VDW0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx39aQ8VDW0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Ddx39aQ8VDW0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx39aQ8VDW0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ddx39aQ8VDW0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Gm7514-201ENSMUST00000209475 934 ntBASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx39aQ8VDW0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx39aQ8VDW0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx39aQ8VDW0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx39aQ8VDW0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx39aQ8VDW0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx39aQ8VDW0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.58■■□□□ 1.05
Ddx39aQ8VDW0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms