Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf8Q8VC56 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf8Q8VC56 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf8Q8VC56 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf8Q8VC56 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Gm12821-201ENSMUST00000120022 600 ntBASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf8Q8VC56 Gm43530-201ENSMUST00000195920 274 ntBASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.62■□□□□ 0.57
Rnf8Q8VC56 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf8Q8VC56 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.6■□□□□ 0.57
Rnf8Q8VC56 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf8Q8VC56 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf8Q8VC56 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf8Q8VC56 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf8Q8VC56 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf8Q8VC56 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Gm21956-201ENSMUST00000179946 522 ntBASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf8Q8VC56 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms