Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nup58Q8R332 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.75■□□□□ 0.91
Nup58Q8R332 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup58Q8R332 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup58Q8R332 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup58Q8R332 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.74■□□□□ 0.91
Nup58Q8R332 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup58Q8R332 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup58Q8R332 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.73■□□□□ 0.91
Nup58Q8R332 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.73■□□□□ 0.91
Nup58Q8R332 Golgb1-201ENSMUST00000023534 498 ntBASIC20.73■□□□□ 0.91
Nup58Q8R332 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nup58Q8R332 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.73■□□□□ 0.91
Nup58Q8R332 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nup58Q8R332 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nup58Q8R332 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup58Q8R332 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Nup58Q8R332 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup58Q8R332 Gm12821-201ENSMUST00000120022 600 ntBASIC20.72■□□□□ 0.91
Nup58Q8R332 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup58Q8R332 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.72■□□□□ 0.91
Nup58Q8R332 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup58Q8R332 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Nup58Q8R332 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nup58Q8R332 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.71■□□□□ 0.91
Nup58Q8R332 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Nup58Q8R332 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup58Q8R332 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup58Q8R332 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.7■□□□□ 0.9
Nup58Q8R332 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.7■□□□□ 0.9
Nup58Q8R332 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.7■□□□□ 0.9
Nup58Q8R332 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Nup58Q8R332 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup58Q8R332 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup58Q8R332 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup58Q8R332 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup58Q8R332 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nup58Q8R332 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup58Q8R332 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup58Q8R332 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.69■□□□□ 0.9
Nup58Q8R332 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup58Q8R332 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nup58Q8R332 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.68■□□□□ 0.9
Nup58Q8R332 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.68■□□□□ 0.9
Nup58Q8R332 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nup58Q8R332 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup58Q8R332 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.67■□□□□ 0.9
Nup58Q8R332 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nup58Q8R332 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nup58Q8R332 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup58Q8R332 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nup58Q8R332 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup58Q8R332 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.66■□□□□ 0.9
Nup58Q8R332 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nup58Q8R332 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms