Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 AC154649.1-201ENSMUST00000227392 384 ntBASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Ddx54Q8K4L0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx54Q8K4L0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Ddx54Q8K4L0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ddx54Q8K4L0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC25.7■■□□□ 1.7
Ddx54Q8K4L0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ddx54Q8K4L0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ddx54Q8K4L0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ddx54Q8K4L0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ddx54Q8K4L0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx54Q8K4L0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx54Q8K4L0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx54Q8K4L0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx54Q8K4L0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx54Q8K4L0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx54Q8K4L0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Gm37055-201ENSMUST00000191866 133 ntBASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx54Q8K4L0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Gm2559-201ENSMUST00000201323 363 ntBASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Gm9987-201ENSMUST00000069768 567 ntBASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx54Q8K4L0 Gm13509-201ENSMUST00000119733 1308 ntBASIC25.66■■□□□ 1.7
Ddx54Q8K4L0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx54Q8K4L0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx54Q8K4L0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx54Q8K4L0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx54Q8K4L0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx54Q8K4L0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Gm9484-201ENSMUST00000195892 1159 ntBASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 AC121577.1-201ENSMUST00000227302 707 ntBASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Ddx54Q8K4L0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ddx54Q8K4L0 AC153881.1-201ENSMUST00000214448 284 ntBASIC25.64■■□□□ 1.7
Ddx54Q8K4L0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ddx54Q8K4L0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ddx54Q8K4L0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ddx54Q8K4L0 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.64■■□□□ 1.69
Ddx54Q8K4L0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Ddx54Q8K4L0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx54Q8K4L0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms