Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmgcs1Q8JZK9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgcs1Q8JZK9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
Hmgcs1Q8JZK9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgcs1Q8JZK9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgcs1Q8JZK9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgcs1Q8JZK9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgcs1Q8JZK9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgcs1Q8JZK9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgcs1Q8JZK9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgcs1Q8JZK9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Hmgcs1Q8JZK9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgcs1Q8JZK9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgcs1Q8JZK9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgcs1Q8JZK9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgcs1Q8JZK9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgcs1Q8JZK9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hmgcs1Q8JZK9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgcs1Q8JZK9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Gm12922-201ENSMUST00000120626 809 ntBASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgcs1Q8JZK9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms