Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Depdc1aQ8CIG0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.07■■□□□ 1.12
Depdc1aQ8CIG0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Depdc1aQ8CIG0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Depdc1aQ8CIG0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Depdc1aQ8CIG0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Depdc1aQ8CIG0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Gm38205-201ENSMUST00000192243 258 ntBASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Depdc1aQ8CIG0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Gm29257-201ENSMUST00000186115 639 ntBASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Depdc1aQ8CIG0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Gm13146-201ENSMUST00000118508 780 ntBASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Depdc1aQ8CIG0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Depdc1aQ8CIG0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Depdc1aQ8CIG0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Depdc1aQ8CIG0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Depdc1aQ8CIG0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Depdc1aQ8CIG0 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.01■■□□□ 1.11
Depdc1aQ8CIG0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Depdc1aQ8CIG0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22■■□□□ 1.11
Depdc1aQ8CIG0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Depdc1aQ8CIG0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.98■■□□□ 1.11
Depdc1aQ8CIG0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Depdc1aQ8CIG0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Depdc1aQ8CIG0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms