Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Gm42555-201ENSMUST00000199304 1039 ntBASIC19■□□□□ 0.63
Rab43Q8CG50 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rab43Q8CG50 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Rab43Q8CG50 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab43Q8CG50 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab43Q8CG50 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rab43Q8CG50 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rab43Q8CG50 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.99■□□□□ 0.63
Rab43Q8CG50 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.99■□□□□ 0.63
Rab43Q8CG50 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab43Q8CG50 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab43Q8CG50 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab43Q8CG50 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab43Q8CG50 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab43Q8CG50 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab43Q8CG50 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab43Q8CG50 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rab43Q8CG50 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.98■□□□□ 0.63
Rab43Q8CG50 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab43Q8CG50 Notumos-201ENSMUST00000151998 2659 ntBASIC18.97■□□□□ 0.63
Rab43Q8CG50 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rab43Q8CG50 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Gm13146-201ENSMUST00000118508 780 ntBASIC18.96■□□□□ 0.63
Rab43Q8CG50 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.96■□□□□ 0.63
Rab43Q8CG50 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rab43Q8CG50 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.95■□□□□ 0.62
Rab43Q8CG50 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.95■□□□□ 0.62
Rab43Q8CG50 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab43Q8CG50 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Gm12441-201ENSMUST00000121806 588 ntBASIC18.94■□□□□ 0.62
Rab43Q8CG50 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.94■□□□□ 0.62
Rab43Q8CG50 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab43Q8CG50 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Rab43Q8CG50 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 AA386476-201ENSMUST00000098781 1665 ntBASIC18.93■□□□□ 0.62
Rab43Q8CG50 Gm38205-201ENSMUST00000192243 258 ntBASIC18.93■□□□□ 0.62
Rab43Q8CG50 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab43Q8CG50 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab43Q8CG50 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rab43Q8CG50 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rab43Q8CG50 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms