Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smc5Q8CG46 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smc5Q8CG46 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smc5Q8CG46 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smc5Q8CG46 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smc5Q8CG46 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smc5Q8CG46 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.16■■□□□ 1.46
Smc5Q8CG46 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.16■■□□□ 1.46
Smc5Q8CG46 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.16■■□□□ 1.46
Smc5Q8CG46 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.16■■□□□ 1.46
Smc5Q8CG46 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Smc5Q8CG46 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smc5Q8CG46 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc5Q8CG46 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc5Q8CG46 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smc5Q8CG46 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smc5Q8CG46 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smc5Q8CG46 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smc5Q8CG46 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Smc5Q8CG46 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smc5Q8CG46 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smc5Q8CG46 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Smc5Q8CG46 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Smc5Q8CG46 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smc5Q8CG46 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Smc5Q8CG46 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smc5Q8CG46 Gm9959-201ENSMUST00000068277 390 ntBASIC24.14■■□□□ 1.45
Smc5Q8CG46 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smc5Q8CG46 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Smc5Q8CG46 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
Smc5Q8CG46 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
Smc5Q8CG46 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smc5Q8CG46 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
Smc5Q8CG46 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC24.13■■□□□ 1.45
Smc5Q8CG46 Gm15546-201ENSMUST00000122095 826 ntBASIC24.13■■□□□ 1.45
Smc5Q8CG46 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc5Q8CG46 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smc5Q8CG46 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.12■■□□□ 1.45
Smc5Q8CG46 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.12■■□□□ 1.45
Smc5Q8CG46 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Smc5Q8CG46 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Smc5Q8CG46 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.11■■□□□ 1.45
Smc5Q8CG46 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.11■■□□□ 1.45
Smc5Q8CG46 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Smc5Q8CG46 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Smc5Q8CG46 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smc5Q8CG46 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc5Q8CG46 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Smc5Q8CG46 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc5Q8CG46 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc5Q8CG46 Rncr4-201ENSMUST00000194541 2234 ntBASIC24.1■■□□□ 1.45
Smc5Q8CG46 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc5Q8CG46 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc5Q8CG46 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc5Q8CG46 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Smc5Q8CG46 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc5Q8CG46 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.08■■□□□ 1.45
Smc5Q8CG46 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Smc5Q8CG46 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
Smc5Q8CG46 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc5Q8CG46 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc5Q8CG46 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc5Q8CG46 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.06■■□□□ 1.44
Smc5Q8CG46 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.06■■□□□ 1.44
Smc5Q8CG46 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc5Q8CG46 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc5Q8CG46 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc5Q8CG46 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.05■■□□□ 1.44
Smc5Q8CG46 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Smc5Q8CG46 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC24.05■■□□□ 1.44
Smc5Q8CG46 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Smc5Q8CG46 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc5Q8CG46 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc5Q8CG46 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms