Protein–RNA interactions for Protein: Q8CFD4

Snx8, Sorting nexin-8, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx8Q8CFD4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Snx8Q8CFD4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx8Q8CFD4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.23■□□□□ 0.67
Snx8Q8CFD4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx8Q8CFD4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Snx8Q8CFD4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Snx8Q8CFD4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snx8Q8CFD4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx8Q8CFD4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Gm43137-201ENSMUST00000198052 594 ntBASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx8Q8CFD4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx8Q8CFD4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx8Q8CFD4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx8Q8CFD4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx8Q8CFD4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx8Q8CFD4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx8Q8CFD4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.15■□□□□ 0.66
Snx8Q8CFD4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms