Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf170Q8CBG9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf170Q8CBG9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf170Q8CBG9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.45■□□□□ 0.22
Rnf170Q8CBG9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf170Q8CBG9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf170Q8CBG9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf170Q8CBG9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Gm43530-201ENSMUST00000195920 274 ntBASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.42■□□□□ 0.22
Rnf170Q8CBG9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf170Q8CBG9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf170Q8CBG9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf170Q8CBG9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf170Q8CBG9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 Mir6236-201ENSMUST00000184437 123 ntBASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.37■□□□□ 0.21
Rnf170Q8CBG9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms