Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.52■■□□□ 1.04
Trim9Q8C7M3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim9Q8C7M3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Trim9Q8C7M3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Trim9Q8C7M3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Gm43173-201ENSMUST00000202246 593 ntBASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim9Q8C7M3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Iqck-206ENSMUST00000208658 2891 ntBASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim9Q8C7M3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Trim9Q8C7M3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim9Q8C7M3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim9Q8C7M3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim9Q8C7M3 Gm45417-201ENSMUST00000209533 758 ntBASIC21.48■■□□□ 1.03
Trim9Q8C7M3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim9Q8C7M3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim9Q8C7M3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Gm8493-201ENSMUST00000196881 489 ntBASIC21.47■■□□□ 1.03
Trim9Q8C7M3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim9Q8C7M3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim9Q8C7M3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Trim9Q8C7M3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Smad6-203ENSMUST00000179458 273 ntBASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Gm6139-201ENSMUST00000079261 882 ntBASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim9Q8C7M3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim9Q8C7M3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.44■■□□□ 1.02
Trim9Q8C7M3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.44■■□□□ 1.02
Trim9Q8C7M3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim9Q8C7M3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
Trim9Q8C7M3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
Trim9Q8C7M3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim9Q8C7M3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms