Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Rarb-207ENSMUST00000225921 2756 ntBASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Tsen54Q8C2A2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tsen54Q8C2A2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tsen54Q8C2A2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tsen54Q8C2A2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tsen54Q8C2A2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Tsen54Q8C2A2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tsen54Q8C2A2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tsen54Q8C2A2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms