Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.48■■□□□ 1.03
Fam43aQ8BUP8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam43aQ8BUP8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Fam43aQ8BUP8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam43aQ8BUP8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Fam43aQ8BUP8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam43aQ8BUP8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.47■■□□□ 1.03
Fam43aQ8BUP8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam43aQ8BUP8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Fam43aQ8BUP8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Fam43aQ8BUP8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam43aQ8BUP8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Fam43aQ8BUP8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam43aQ8BUP8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Fam43aQ8BUP8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam43aQ8BUP8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam43aQ8BUP8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam43aQ8BUP8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Gm7143-201ENSMUST00000222811 859 ntBASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam43aQ8BUP8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43aQ8BUP8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43aQ8BUP8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43aQ8BUP8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43aQ8BUP8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43aQ8BUP8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43aQ8BUP8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms