Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr7Q8BU04 Gm9988-201ENSMUST00000069786 435 ntBASIC19.75■□□□□ 0.75
Ubr7Q8BU04 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr7Q8BU04 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr7Q8BU04 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Gm13234-201ENSMUST00000120010 747 ntBASIC19.73■□□□□ 0.75
Ubr7Q8BU04 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Gm42569-201ENSMUST00000200539 472 ntBASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Gm18671-201ENSMUST00000214826 683 ntBASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr7Q8BU04 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Gm42778-201ENSMUST00000199644 553 ntBASIC19.72■□□□□ 0.75
Ubr7Q8BU04 AV356131-201ENSMUST00000206201 750 ntBASIC19.72■□□□□ 0.75
Ubr7Q8BU04 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr7Q8BU04 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Gm27405-201ENSMUST00000184201 112 ntBASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Gm7291-201ENSMUST00000199147 382 ntBASIC19.71■□□□□ 0.75
Ubr7Q8BU04 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.71■□□□□ 0.75
Ubr7Q8BU04 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ubr7Q8BU04 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr7Q8BU04 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr7Q8BU04 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr7Q8BU04 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr7Q8BU04 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr7Q8BU04 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ubr7Q8BU04 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.66■□□□□ 0.74
Ubr7Q8BU04 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr7Q8BU04 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.66■□□□□ 0.74
Ubr7Q8BU04 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr7Q8BU04 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms