Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Gm44878-201ENSMUST00000205812 1295 ntBASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col16a1Q8BLX7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.76
Col16a1Q8BLX7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Gm10812-201ENSMUST00000099864 546 ntBASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col16a1Q8BLX7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
Col16a1Q8BLX7 Trmt13-210ENSMUST00000198454 880 ntBASIC26■■□□□ 1.75
Col16a1Q8BLX7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col16a1Q8BLX7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col16a1Q8BLX7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
Col16a1Q8BLX7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col16a1Q8BLX7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 AC158538.1-201ENSMUST00000225870 294 ntBASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 AA386476-201ENSMUST00000098781 1665 ntBASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col16a1Q8BLX7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Gm13181-201ENSMUST00000120117 1069 ntBASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col16a1Q8BLX7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Gm29241-201ENSMUST00000189260 1096 ntBASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC25.97■■□□□ 1.75
Col16a1Q8BLX7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col16a1Q8BLX7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Col16a1Q8BLX7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.75
Col16a1Q8BLX7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.95■■□□□ 1.75
Col16a1Q8BLX7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col16a1Q8BLX7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col16a1Q8BLX7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col16a1Q8BLX7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col16a1Q8BLX7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col16a1Q8BLX7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Col16a1Q8BLX7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Col16a1Q8BLX7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Col16a1Q8BLX7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Col16a1Q8BLX7 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.94■■□□□ 1.74
Col16a1Q8BLX7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Col16a1Q8BLX7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col16a1Q8BLX7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col16a1Q8BLX7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col16a1Q8BLX7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col16a1Q8BLX7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col16a1Q8BLX7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Col16a1Q8BLX7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Col16a1Q8BLX7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms