Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim6Q8BGE7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trim6Q8BGE7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.55■□□□□ 0.88
Trim6Q8BGE7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim6Q8BGE7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim6Q8BGE7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Gm43530-201ENSMUST00000195920 274 ntBASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Trim6Q8BGE7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.52■□□□□ 0.88
Trim6Q8BGE7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Gm9870-201ENSMUST00000063874 645 ntBASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim6Q8BGE7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim6Q8BGE7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim6Q8BGE7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim6Q8BGE7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim6Q8BGE7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms