Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp38Q80UU2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rpp38Q80UU2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp38Q80UU2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Gm43017-201ENSMUST00000198296 752 ntBASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp38Q80UU2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Gm26833-201ENSMUST00000180899 440 ntBASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp38Q80UU2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp38Q80UU2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp38Q80UU2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.42■□□□□ 0.7
Rpp38Q80UU2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp38Q80UU2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms