Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Dhx40Q6PE54 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Dhx40Q6PE54 Etf1-202ENSMUST00000180351 108 ntBASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Dhx40Q6PE54 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Dhx40Q6PE54 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Dhx40Q6PE54 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Dhx40Q6PE54 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Dhx40Q6PE54 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Dhx40Q6PE54 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Dhx40Q6PE54 BC021767-201ENSMUST00000126387 1716 ntBASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Dhx40Q6PE54 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Dhx40Q6PE54 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.58■■□□□ 1.05
Dhx40Q6PE54 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Dhx40Q6PE54 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.58■■□□□ 1.05
Dhx40Q6PE54 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Dhx40Q6PE54 Gm7417-201ENSMUST00000192950 473 ntBASIC21.58■■□□□ 1.05
Dhx40Q6PE54 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Dhx40Q6PE54 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.58■■□□□ 1.04
Dhx40Q6PE54 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Dhx40Q6PE54 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Dhx40Q6PE54 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.57■■□□□ 1.04
Dhx40Q6PE54 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Dhx40Q6PE54 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Dhx40Q6PE54 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms