Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Notch3Q61982 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.83□□□□□ -0.04
Notch3Q61982 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Notch3Q61982 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Notch3Q61982 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Notch3Q61982 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Notch3Q61982 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Notch3Q61982 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Notch3Q61982 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Notch3Q61982 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.82□□□□□ -0.04
Notch3Q61982 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Notch3Q61982 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Notch3Q61982 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 Nespas-201ENSMUST00000143738 1083 ntBASIC14.82□□□□□ -0.04
Notch3Q61982 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Notch3Q61982 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
Notch3Q61982 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Notch3Q61982 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.81□□□□□ -0.04
Notch3Q61982 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Notch3Q61982 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Notch3Q61982 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Notch3Q61982 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Notch3Q61982 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Notch3Q61982 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.8□□□□□ -0.04
Notch3Q61982 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.8□□□□□ -0.04
Notch3Q61982 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Notch3Q61982 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Notch3Q61982 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Notch3Q61982 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Notch3Q61982 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.79□□□□□ -0.04
Notch3Q61982 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Notch3Q61982 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.78□□□□□ -0.04
Notch3Q61982 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Notch3Q61982 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.78□□□□□ -0.04
Notch3Q61982 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.78□□□□□ -0.04
Notch3Q61982 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Notch3Q61982 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Notch3Q61982 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.77□□□□□ -0.04
Notch3Q61982 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.77□□□□□ -0.04
Notch3Q61982 Gm13234-201ENSMUST00000120010 747 ntBASIC14.77□□□□□ -0.04
Notch3Q61982 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.77□□□□□ -0.04
Notch3Q61982 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms