Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Foxn1Q61575 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Foxn1Q61575 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Foxn1Q61575 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Foxn1Q61575 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.39■■□□□ 1.17
Foxn1Q61575 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Foxn1Q61575 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Foxn1Q61575 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Foxn1Q61575 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.38■■□□□ 1.17
Foxn1Q61575 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Foxn1Q61575 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.38■■□□□ 1.17
Foxn1Q61575 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Foxn1Q61575 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Foxn1Q61575 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.37■■□□□ 1.17
Foxn1Q61575 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Foxn1Q61575 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Foxn1Q61575 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Foxn1Q61575 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Foxn1Q61575 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Foxn1Q61575 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Foxn1Q61575 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Foxn1Q61575 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Foxn1Q61575 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Foxn1Q61575 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.36■■□□□ 1.17
Foxn1Q61575 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.36■■□□□ 1.17
Foxn1Q61575 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Foxn1Q61575 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
Foxn1Q61575 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Foxn1Q61575 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Foxn1Q61575 Gm37055-201ENSMUST00000191866 133 ntBASIC22.35■■□□□ 1.17
Foxn1Q61575 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.35■■□□□ 1.17
Foxn1Q61575 Gm9987-201ENSMUST00000069768 567 ntBASIC22.35■■□□□ 1.17
Foxn1Q61575 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Foxn1Q61575 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Foxn1Q61575 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
Foxn1Q61575 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Foxn1Q61575 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Foxn1Q61575 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxn1Q61575 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Foxn1Q61575 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Foxn1Q61575 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.34■■□□□ 1.17
Foxn1Q61575 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.34■■□□□ 1.17
Foxn1Q61575 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Foxn1Q61575 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Foxn1Q61575 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxn1Q61575 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Foxn1Q61575 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Foxn1Q61575 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Foxn1Q61575 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Foxn1Q61575 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Foxn1Q61575 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.33■■□□□ 1.16
Foxn1Q61575 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxn1Q61575 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.32■■□□□ 1.16
Foxn1Q61575 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxn1Q61575 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxn1Q61575 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxn1Q61575 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxn1Q61575 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxn1Q61575 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Foxn1Q61575 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Foxn1Q61575 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.31■■□□□ 1.16
Foxn1Q61575 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Foxn1Q61575 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxn1Q61575 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxn1Q61575 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxn1Q61575 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxn1Q61575 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxn1Q61575 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Foxn1Q61575 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.3■■□□□ 1.16
Foxn1Q61575 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Foxn1Q61575 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.3■■□□□ 1.16
Foxn1Q61575 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.3■■□□□ 1.16
Foxn1Q61575 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.3■■□□□ 1.16
Foxn1Q61575 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Foxn1Q61575 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.29■■□□□ 1.16
Foxn1Q61575 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxn1Q61575 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Foxn1Q61575 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxn1Q61575 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxn1Q61575 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms