Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxc1Q61572 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Foxc1Q61572 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Foxc1Q61572 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.16□□□□□ -0.14
Foxc1Q61572 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Foxc1Q61572 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Foxc1Q61572 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Gm18284-201ENSMUST00000172604 624 ntBASIC14.16□□□□□ -0.14
Foxc1Q61572 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Foxc1Q61572 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxc1Q61572 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Foxc1Q61572 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.15□□□□□ -0.14
Foxc1Q61572 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.15□□□□□ -0.14
Foxc1Q61572 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.15□□□□□ -0.14
Foxc1Q61572 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.15□□□□□ -0.14
Foxc1Q61572 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.15□□□□□ -0.14
Foxc1Q61572 Spcs1-204ENSMUST00000226782 949 ntBASIC14.15□□□□□ -0.14
Foxc1Q61572 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Foxc1Q61572 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.15□□□□□ -0.14
Foxc1Q61572 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxc1Q61572 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.15□□□□□ -0.15
Foxc1Q61572 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Foxc1Q61572 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.14□□□□□ -0.15
Foxc1Q61572 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Foxc1Q61572 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.14□□□□□ -0.15
Foxc1Q61572 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Foxc1Q61572 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.14□□□□□ -0.15
Foxc1Q61572 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.14□□□□□ -0.15
Foxc1Q61572 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxc1Q61572 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Foxc1Q61572 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.14□□□□□ -0.15
Foxc1Q61572 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxc1Q61572 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.13□□□□□ -0.15
Foxc1Q61572 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxc1Q61572 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxc1Q61572 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxc1Q61572 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxc1Q61572 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxc1Q61572 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.12□□□□□ -0.15
Foxc1Q61572 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Foxc1Q61572 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxc1Q61572 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms