Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.84■□□□□ 0.45
Clcn4Q61418 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Mir6236-201ENSMUST00000184437 123 ntBASIC17.84■□□□□ 0.45
Clcn4Q61418 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn4Q61418 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn4Q61418 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn4Q61418 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn4Q61418 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn4Q61418 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.83■□□□□ 0.44
Clcn4Q61418 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.83■□□□□ 0.44
Clcn4Q61418 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn4Q61418 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn4Q61418 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn4Q61418 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Clcn4Q61418 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Clcn4Q61418 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn4Q61418 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn4Q61418 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Clcn4Q61418 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn4Q61418 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn4Q61418 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn4Q61418 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clcn4Q61418 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.81■□□□□ 0.44
Clcn4Q61418 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn4Q61418 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn4Q61418 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.81■□□□□ 0.44
Clcn4Q61418 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn4Q61418 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn4Q61418 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn4Q61418 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Clcn4Q61418 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Gm45417-201ENSMUST00000209533 758 ntBASIC17.8■□□□□ 0.44
Clcn4Q61418 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn4Q61418 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.8■□□□□ 0.44
Clcn4Q61418 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clcn4Q61418 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Clcn4Q61418 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Clcn4Q61418 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.79■□□□□ 0.44
Clcn4Q61418 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn4Q61418 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clcn4Q61418 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Clcn4Q61418 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clcn4Q61418 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.78■□□□□ 0.44
Clcn4Q61418 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn4Q61418 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn4Q61418 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn4Q61418 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn4Q61418 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn4Q61418 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Clcn4Q61418 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn4Q61418 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Clcn4Q61418 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.77■□□□□ 0.44
Clcn4Q61418 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.77■□□□□ 0.44
Clcn4Q61418 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn4Q61418 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms