Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sim1Q61045 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sim1Q61045 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sim1Q61045 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Gm11421-201ENSMUST00000122124 294 ntBASIC19.31■□□□□ 0.68
Sim1Q61045 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.31■□□□□ 0.68
Sim1Q61045 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sim1Q61045 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Sim1Q61045 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sim1Q61045 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sim1Q61045 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Sim1Q61045 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.3■□□□□ 0.68
Sim1Q61045 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sim1Q61045 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sim1Q61045 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sim1Q61045 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.29■□□□□ 0.68
Sim1Q61045 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.29■□□□□ 0.68
Sim1Q61045 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sim1Q61045 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sim1Q61045 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sim1Q61045 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.28■□□□□ 0.68
Sim1Q61045 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sim1Q61045 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sim1Q61045 Nespas-201ENSMUST00000143738 1083 ntBASIC19.28■□□□□ 0.68
Sim1Q61045 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sim1Q61045 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.28■□□□□ 0.68
Sim1Q61045 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sim1Q61045 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.27■□□□□ 0.68
Sim1Q61045 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.27■□□□□ 0.68
Sim1Q61045 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.27■□□□□ 0.68
Sim1Q61045 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.27■□□□□ 0.68
Sim1Q61045 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sim1Q61045 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Gm9988-201ENSMUST00000069786 435 ntBASIC19.27■□□□□ 0.68
Sim1Q61045 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sim1Q61045 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sim1Q61045 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.27■□□□□ 0.67
Sim1Q61045 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sim1Q61045 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sim1Q61045 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sim1Q61045 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.26■□□□□ 0.67
Sim1Q61045 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sim1Q61045 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sim1Q61045 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sim1Q61045 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sim1Q61045 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sim1Q61045 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.25■□□□□ 0.67
Sim1Q61045 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sim1Q61045 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sim1Q61045 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sim1Q61045 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sim1Q61045 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sim1Q61045 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms