Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.52■□□□□ 0.55
Nr1h4Q60641 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nr1h4Q60641 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h4Q60641 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.5■□□□□ 0.55
Nr1h4Q60641 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h4Q60641 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h4Q60641 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Nr1h4Q60641 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1h4Q60641 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nr1h4Q60641 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h4Q60641 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.49■□□□□ 0.55
Nr1h4Q60641 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.49■□□□□ 0.55
Nr1h4Q60641 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Nr1h4Q60641 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nr1h4Q60641 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.48■□□□□ 0.55
Nr1h4Q60641 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1h4Q60641 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1h4Q60641 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nr1h4Q60641 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nr1h4Q60641 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Nr1h4Q60641 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1h4Q60641 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.44■□□□□ 0.54
Nr1h4Q60641 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nr1h4Q60641 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Etf1-202ENSMUST00000180351 108 ntBASIC18.43■□□□□ 0.54
Nr1h4Q60641 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h4Q60641 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms