Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Satb1Q60611 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.07■□□□□ 0.8
Satb1Q60611 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.07■□□□□ 0.8
Satb1Q60611 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Satb1Q60611 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Satb1Q60611 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Satb1Q60611 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Satb1Q60611 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Satb1Q60611 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.06■□□□□ 0.8
Satb1Q60611 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.06■□□□□ 0.8
Satb1Q60611 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.06■□□□□ 0.8
Satb1Q60611 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Satb1Q60611 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Satb1Q60611 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Satb1Q60611 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Satb1Q60611 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Satb1Q60611 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Satb1Q60611 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Satb1Q60611 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.05■□□□□ 0.8
Satb1Q60611 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Reep4-203ENSMUST00000226563 1444 ntBASIC20.05■□□□□ 0.8
Satb1Q60611 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.05■□□□□ 0.8
Satb1Q60611 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.05■□□□□ 0.8
Satb1Q60611 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Satb1Q60611 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.05■□□□□ 0.8
Satb1Q60611 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Satb1Q60611 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Satb1Q60611 Gm13836-201ENSMUST00000121159 501 ntBASIC20.04■□□□□ 0.8
Satb1Q60611 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.04■□□□□ 0.8
Satb1Q60611 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.04■□□□□ 0.8
Satb1Q60611 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Satb1Q60611 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Satb1Q60611 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.04■□□□□ 0.8
Satb1Q60611 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Satb1Q60611 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Satb1Q60611 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Satb1Q60611 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.03■□□□□ 0.8
Satb1Q60611 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Satb1Q60611 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Satb1Q60611 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Satb1Q60611 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
Satb1Q60611 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.02■□□□□ 0.8
Satb1Q60611 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Satb1Q60611 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Satb1Q60611 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Satb1Q60611 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Satb1Q60611 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Satb1Q60611 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.01■□□□□ 0.79
Satb1Q60611 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.01■□□□□ 0.79
Satb1Q60611 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Satb1Q60611 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Satb1Q60611 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Satb1Q60611 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20■□□□□ 0.79
Satb1Q60611 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Satb1Q60611 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Satb1Q60611 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20■□□□□ 0.79
Satb1Q60611 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Satb1Q60611 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Satb1Q60611 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Satb1Q60611 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Satb1Q60611 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms