Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Ubr3Q5U430 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Ubr3Q5U430 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr3Q5U430 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr3Q5U430 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ubr3Q5U430 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.12■■□□□ 1.45
Ubr3Q5U430 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr3Q5U430 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.12■■□□□ 1.45
Ubr3Q5U430 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Ubr3Q5U430 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Ubr3Q5U430 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ubr3Q5U430 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Gm5643-201ENSMUST00000117081 966 ntBASIC24.11■■□□□ 1.45
Ubr3Q5U430 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubr3Q5U430 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr3Q5U430 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr3Q5U430 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ubr3Q5U430 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC24.09■■□□□ 1.45
Ubr3Q5U430 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr3Q5U430 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ubr3Q5U430 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.09■■□□□ 1.45
Ubr3Q5U430 Gm715-201ENSMUST00000117865 831 ntBASIC24.09■■□□□ 1.45
Ubr3Q5U430 Gm7860-201ENSMUST00000121190 879 ntBASIC24.09■■□□□ 1.45
Ubr3Q5U430 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Ubr3Q5U430 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ubr3Q5U430 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ubr3Q5U430 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Ubr3Q5U430 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC24.08■■□□□ 1.45
Ubr3Q5U430 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ubr3Q5U430 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Ubr3Q5U430 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr3Q5U430 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr3Q5U430 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC24.07■■□□□ 1.44
Ubr3Q5U430 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubr3Q5U430 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC24.07■■□□□ 1.44
Ubr3Q5U430 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Ubr3Q5U430 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr3Q5U430 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Ubr3Q5U430 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Ubr3Q5U430 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Ubr3Q5U430 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubr3Q5U430 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Ubr3Q5U430 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Ubr3Q5U430 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr3Q5U430 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr3Q5U430 Gm12896-201ENSMUST00000118430 226 ntBASIC24.04■■□□□ 1.44
Ubr3Q5U430 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.04■■□□□ 1.44
Ubr3Q5U430 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr3Q5U430 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr3Q5U430 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ubr3Q5U430 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr3Q5U430 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr3Q5U430 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr3Q5U430 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr3Q5U430 Gm13509-201ENSMUST00000119733 1308 ntBASIC24.02■■□□□ 1.44
Ubr3Q5U430 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr3Q5U430 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr3Q5U430 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.02■■□□□ 1.43
Ubr3Q5U430 Dio3-201ENSMUST00000097228 1449 ntBASIC24.01■■□□□ 1.43
Ubr3Q5U430 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr3Q5U430 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ubr3Q5U430 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Ubr3Q5U430 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ubr3Q5U430 AA386476-201ENSMUST00000098781 1665 ntBASIC24■■□□□ 1.43
Ubr3Q5U430 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr3Q5U430 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Ubr3Q5U430 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
Ubr3Q5U430 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr3Q5U430 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC24■■□□□ 1.43
Ubr3Q5U430 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC24■■□□□ 1.43
Ubr3Q5U430 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC24■■□□□ 1.43
Ubr3Q5U430 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ubr3Q5U430 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24■■□□□ 1.43
Ubr3Q5U430 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr3Q5U430 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr3Q5U430 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr3Q5U430 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.99■■□□□ 1.43
Ubr3Q5U430 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.99■■□□□ 1.43
Ubr3Q5U430 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr3Q5U430 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr3Q5U430 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.99■■□□□ 1.43
Ubr3Q5U430 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms