Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Gm9806-201ENSMUST00000051080 552 ntBASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav7d-4Q5R1H9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav7d-4Q5R1H9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Trav7d-4Q5R1H9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-4Q5R1H9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Gm16437-201ENSMUST00000025669 507 ntBASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-4Q5R1H9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Scarna2-201ENSMUST00000157560 414 ntBASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-4Q5R1H9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 BC021767-201ENSMUST00000126387 1716 ntBASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-4Q5R1H9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav7d-4Q5R1H9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms