Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdv2-2Q5R1A4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdv2-2Q5R1A4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.87□□□□□ -0.03
Trdv2-2Q5R1A4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-2Q5R1A4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-2Q5R1A4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-2Q5R1A4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trdv2-2Q5R1A4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trdv2-2Q5R1A4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Trdv2-2Q5R1A4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Gm43566-201ENSMUST00000196851 808 ntBASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-2Q5R1A4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Gm7143-201ENSMUST00000222811 859 ntBASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.82□□□□□ -0.04
Trdv2-2Q5R1A4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-2Q5R1A4 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms