Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clhc1Q5M6W3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clhc1Q5M6W3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clhc1Q5M6W3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.72■□□□□ 0.59
Clhc1Q5M6W3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Clhc1Q5M6W3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Etf1-202ENSMUST00000180351 108 ntBASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clhc1Q5M6W3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Clhc1Q5M6W3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clhc1Q5M6W3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clhc1Q5M6W3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Gm7417-201ENSMUST00000192950 473 ntBASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clhc1Q5M6W3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clhc1Q5M6W3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Gm9959-201ENSMUST00000068277 390 ntBASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clhc1Q5M6W3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Rps24-207ENSMUST00000224568 714 ntBASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.65■□□□□ 0.58
Clhc1Q5M6W3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clhc1Q5M6W3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clhc1Q5M6W3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clhc1Q5M6W3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clhc1Q5M6W3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clhc1Q5M6W3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clhc1Q5M6W3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clhc1Q5M6W3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clhc1Q5M6W3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clhc1Q5M6W3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms