Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rc3h1Q4VGL6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rc3h1Q4VGL6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rc3h1Q4VGL6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.59■■□□□ 1.21
Rc3h1Q4VGL6 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.59■■□□□ 1.21
Rc3h1Q4VGL6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Rc3h1Q4VGL6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rc3h1Q4VGL6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rc3h1Q4VGL6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rc3h1Q4VGL6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rc3h1Q4VGL6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rc3h1Q4VGL6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Rc3h1Q4VGL6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.57■■□□□ 1.2
Rc3h1Q4VGL6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rc3h1Q4VGL6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rc3h1Q4VGL6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rc3h1Q4VGL6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rc3h1Q4VGL6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rc3h1Q4VGL6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rc3h1Q4VGL6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Gm38205-201ENSMUST00000192243 258 ntBASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rc3h1Q4VGL6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rc3h1Q4VGL6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rc3h1Q4VGL6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rc3h1Q4VGL6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rc3h1Q4VGL6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rc3h1Q4VGL6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rc3h1Q4VGL6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rc3h1Q4VGL6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rc3h1Q4VGL6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rc3h1Q4VGL6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rc3h1Q4VGL6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.51■■□□□ 1.19
Rc3h1Q4VGL6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rc3h1Q4VGL6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rc3h1Q4VGL6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rc3h1Q4VGL6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rc3h1Q4VGL6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms