Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Pds5bQ4VA53 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Pds5bQ4VA53 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC34.71■■■■□ 3.15
Pds5bQ4VA53 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC34.7■■■■□ 3.15
Pds5bQ4VA53 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Pds5bQ4VA53 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Pds5bQ4VA53 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC34.7■■■■□ 3.15
Pds5bQ4VA53 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC34.7■■■■□ 3.15
Pds5bQ4VA53 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC34.7■■■■□ 3.15
Pds5bQ4VA53 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC34.7■■■■□ 3.14
Pds5bQ4VA53 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Pds5bQ4VA53 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Pds5bQ4VA53 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC34.69■■■■□ 3.14
Pds5bQ4VA53 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC34.69■■■■□ 3.14
Pds5bQ4VA53 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Pds5bQ4VA53 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Pds5bQ4VA53 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Gm6433-201ENSMUST00000118634 875 ntBASIC34.68■■■■□ 3.14
Pds5bQ4VA53 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Nrn1-203ENSMUST00000223611 1443 ntBASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Pds5bQ4VA53 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
Pds5bQ4VA53 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Pds5bQ4VA53 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Pds5bQ4VA53 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC34.67■■■■□ 3.14
Pds5bQ4VA53 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC34.67■■■■□ 3.14
Pds5bQ4VA53 Mir5122-201ENSMUST00000175004 89 ntBASIC34.67■■■■□ 3.14
Pds5bQ4VA53 Gm20472-201ENSMUST00000174403 1240 ntBASIC34.66■■■■□ 3.14
Pds5bQ4VA53 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Pds5bQ4VA53 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Pds5bQ4VA53 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
Pds5bQ4VA53 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Pds5bQ4VA53 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Pds5bQ4VA53 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Pds5bQ4VA53 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC34.65■■■■□ 3.14
Pds5bQ4VA53 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
Pds5bQ4VA53 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Gm10459-201ENSMUST00000202708 1155 ntBASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Pds5bQ4VA53 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Pds5bQ4VA53 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC34.63■■■■□ 3.13
Pds5bQ4VA53 Gm15378-201ENSMUST00000121894 207 ntBASIC34.63■■■■□ 3.13
Pds5bQ4VA53 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC34.63■■■■□ 3.13
Pds5bQ4VA53 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
Pds5bQ4VA53 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC34.62■■■■□ 3.13
Pds5bQ4VA53 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC34.62■■■■□ 3.13
Pds5bQ4VA53 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Pds5bQ4VA53 Gm43799-201ENSMUST00000201845 579 ntBASIC34.62■■■■□ 3.13
Pds5bQ4VA53 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Pds5bQ4VA53 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Pds5bQ4VA53 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
Pds5bQ4VA53 Gm10167-201ENSMUST00000150411 1479 ntBASIC34.61■■■■□ 3.13
Pds5bQ4VA53 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Pds5bQ4VA53 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Pds5bQ4VA53 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Pds5bQ4VA53 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Pds5bQ4VA53 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC34.6■■■■□ 3.13
Pds5bQ4VA53 Gm21362-201ENSMUST00000194272 928 ntBASIC34.6■■■■□ 3.13
Pds5bQ4VA53 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC34.6■■■■□ 3.13
Pds5bQ4VA53 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
Pds5bQ4VA53 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
Pds5bQ4VA53 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Pds5bQ4VA53 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Pds5bQ4VA53 CT010444.2-201ENSMUST00000217877 1629 ntBASIC34.57■■■■□ 3.13
Pds5bQ4VA53 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
Pds5bQ4VA53 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.13
Pds5bQ4VA53 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Pds5bQ4VA53 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Pds5bQ4VA53 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Pds5bQ4VA53 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Pds5bQ4VA53 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Pds5bQ4VA53 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC34.56■■■■□ 3.12
Pds5bQ4VA53 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Pds5bQ4VA53 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Pds5bQ4VA53 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Pds5bQ4VA53 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
Pds5bQ4VA53 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Pds5bQ4VA53 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Pds5bQ4VA53 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms