Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cks1brtQ3UNC9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1brtQ3UNC9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cks1brtQ3UNC9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1brtQ3UNC9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1brtQ3UNC9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1brtQ3UNC9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms