Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smcr8Q3UMB5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smcr8Q3UMB5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Smcr8Q3UMB5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smcr8Q3UMB5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smcr8Q3UMB5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smcr8Q3UMB5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Reep4-203ENSMUST00000226563 1444 ntBASIC20.86■□□□□ 0.93
Smcr8Q3UMB5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smcr8Q3UMB5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smcr8Q3UMB5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms