Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smu1Q3UKJ7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smu1Q3UKJ7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.62■□□□□ 0.57
Smu1Q3UKJ7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smu1Q3UKJ7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smu1Q3UKJ7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smu1Q3UKJ7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smu1Q3UKJ7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smu1Q3UKJ7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.58■□□□□ 0.57
Smu1Q3UKJ7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smu1Q3UKJ7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smu1Q3UKJ7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smu1Q3UKJ7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Gm45102-201ENSMUST00000207427 857 ntBASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smu1Q3UKJ7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smu1Q3UKJ7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smu1Q3UKJ7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smu1Q3UKJ7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms