Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6aQ3UHK8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6aQ3UHK8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc6aQ3UHK8 Gm26524-201ENSMUST00000192339 390 ntBASIC18.18■□□□□ 0.5
Tnrc6aQ3UHK8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.18■□□□□ 0.5
Tnrc6aQ3UHK8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc6aQ3UHK8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc6aQ3UHK8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Gm6211-202ENSMUST00000167849 925 ntBASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc6aQ3UHK8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnrc6aQ3UHK8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc6aQ3UHK8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc6aQ3UHK8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnrc6aQ3UHK8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnrc6aQ3UHK8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnrc6aQ3UHK8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Gm38205-201ENSMUST00000192243 258 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms