Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Snx27Q3UHD6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.14■□□□□ 0.97
Snx27Q3UHD6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.14■□□□□ 0.97
Snx27Q3UHD6 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.14■□□□□ 0.97
Snx27Q3UHD6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snx27Q3UHD6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.14■□□□□ 0.97
Snx27Q3UHD6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snx27Q3UHD6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snx27Q3UHD6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Gm38205-201ENSMUST00000192243 258 ntBASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snx27Q3UHD6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Snx27Q3UHD6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Snx27Q3UHD6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Snx27Q3UHD6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Snx27Q3UHD6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.11■□□□□ 0.97
Snx27Q3UHD6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Snx27Q3UHD6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Snx27Q3UHD6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Snx27Q3UHD6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Snx27Q3UHD6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Snx27Q3UHD6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.1■□□□□ 0.97
Snx27Q3UHD6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Snx27Q3UHD6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Gm13146-201ENSMUST00000118508 780 ntBASIC21.09■□□□□ 0.97
Snx27Q3UHD6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Snx27Q3UHD6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Gm7514-201ENSMUST00000209475 934 ntBASIC21.08■□□□□ 0.97
Snx27Q3UHD6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snx27Q3UHD6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Snx27Q3UHD6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Snx27Q3UHD6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.06■□□□□ 0.96
Snx27Q3UHD6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Snx27Q3UHD6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.06■□□□□ 0.96
Snx27Q3UHD6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.06■□□□□ 0.96
Snx27Q3UHD6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Snx27Q3UHD6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Snx27Q3UHD6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Snx27Q3UHD6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.04■□□□□ 0.96
Snx27Q3UHD6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms