Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Iqck-206ENSMUST00000208658 2891 ntBASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Mir7075-201ENSMUST00000184187 82 ntBASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rapgef1Q3UHC1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rapgef1Q3UHC1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
Rapgef1Q3UHC1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rapgef1Q3UHC1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rapgef1Q3UHC1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rapgef1Q3UHC1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rapgef1Q3UHC1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rapgef1Q3UHC1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rapgef1Q3UHC1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rapgef1Q3UHC1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rapgef1Q3UHC1 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.18■□□□□ 0.98
Rapgef1Q3UHC1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rapgef1Q3UHC1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rapgef1Q3UHC1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rapgef1Q3UHC1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 Gm8493-201ENSMUST00000196881 489 ntBASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rapgef1Q3UHC1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rapgef1Q3UHC1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rapgef1Q3UHC1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.14■□□□□ 0.98
Rapgef1Q3UHC1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rapgef1Q3UHC1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rapgef1Q3UHC1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms