Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.69■□□□□ 0.74
Smad4P97471 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smad4P97471 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad4P97471 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smad4P97471 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smad4P97471 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.69■□□□□ 0.74
Smad4P97471 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smad4P97471 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smad4P97471 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.69■□□□□ 0.74
Smad4P97471 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smad4P97471 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.69■□□□□ 0.74
Smad4P97471 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.68■□□□□ 0.74
Smad4P97471 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smad4P97471 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad4P97471 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad4P97471 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad4P97471 Gm37055-201ENSMUST00000191866 133 ntBASIC19.68■□□□□ 0.74
Smad4P97471 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad4P97471 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad4P97471 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad4P97471 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smad4P97471 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smad4P97471 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smad4P97471 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad4P97471 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad4P97471 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.67■□□□□ 0.74
Smad4P97471 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad4P97471 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smad4P97471 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad4P97471 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Smad4P97471 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smad4P97471 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.66■□□□□ 0.74
Smad4P97471 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.66■□□□□ 0.74
Smad4P97471 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad4P97471 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smad4P97471 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.65■□□□□ 0.74
Smad4P97471 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.65■□□□□ 0.74
Smad4P97471 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Gm18666-201ENSMUST00000190039 958 ntBASIC19.65■□□□□ 0.74
Smad4P97471 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Smad4P97471 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad4P97471 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.64■□□□□ 0.74
Smad4P97471 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.64■□□□□ 0.73
Smad4P97471 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.64■□□□□ 0.73
Smad4P97471 Dio3-201ENSMUST00000097228 1449 ntBASIC19.64■□□□□ 0.73
Smad4P97471 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad4P97471 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smad4P97471 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smad4P97471 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad4P97471 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smad4P97471 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad4P97471 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smad4P97471 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smad4P97471 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.63■□□□□ 0.73
Smad4P97471 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Smad4P97471 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Smad4P97471 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.63■□□□□ 0.73
Smad4P97471 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad4P97471 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad4P97471 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smad4P97471 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smad4P97471 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smad4P97471 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smad4P97471 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Smad4P97471 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.61■□□□□ 0.73
Smad4P97471 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad4P97471 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smad4P97471 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smad4P97471 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad4P97471 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Smad4P97471 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad4P97471 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smad4P97471 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.61■□□□□ 0.73
Smad4P97471 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.61■□□□□ 0.73
Smad4P97471 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad4P97471 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad4P97471 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.6■□□□□ 0.73
Smad4P97471 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.6■□□□□ 0.73
Smad4P97471 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Smad4P97471 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.6■□□□□ 0.73
Smad4P97471 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.6■□□□□ 0.73
Smad4P97471 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms