Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.76■□□□□ 0.43
Lsm3P62311 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.76■□□□□ 0.43
Lsm3P62311 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.76■□□□□ 0.43
Lsm3P62311 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.76■□□□□ 0.43
Lsm3P62311 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm3P62311 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lsm3P62311 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.75■□□□□ 0.43
Lsm3P62311 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lsm3P62311 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Gm16437-201ENSMUST00000025669 507 ntBASIC17.75■□□□□ 0.43
Lsm3P62311 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Lsm3P62311 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Lsm3P62311 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm3P62311 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Lsm3P62311 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.74■□□□□ 0.43
Lsm3P62311 Gm6311-201ENSMUST00000073790 878 ntBASIC17.74■□□□□ 0.43
Lsm3P62311 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm3P62311 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lsm3P62311 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm3P62311 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
Lsm3P62311 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm3P62311 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm3P62311 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm3P62311 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.73■□□□□ 0.43
Lsm3P62311 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lsm3P62311 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lsm3P62311 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Scarna2-201ENSMUST00000157560 414 ntBASIC17.72■□□□□ 0.43
Lsm3P62311 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lsm3P62311 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lsm3P62311 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.72■□□□□ 0.43
Lsm3P62311 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm3P62311 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Lsm3P62311 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm3P62311 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lsm3P62311 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm3P62311 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm3P62311 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm3P62311 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm3P62311 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
Lsm3P62311 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm3P62311 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm3P62311 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm3P62311 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lsm3P62311 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lsm3P62311 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.7■□□□□ 0.42
Lsm3P62311 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Lsm3P62311 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lsm3P62311 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.7■□□□□ 0.42
Lsm3P62311 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm3P62311 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms