Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.83■□□□□ 0.93
NcanP55066 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.83■□□□□ 0.93
NcanP55066 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.83■□□□□ 0.93
NcanP55066 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NcanP55066 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NcanP55066 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NcanP55066 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.83■□□□□ 0.92
NcanP55066 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NcanP55066 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NcanP55066 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.82■□□□□ 0.92
NcanP55066 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NcanP55066 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NcanP55066 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NcanP55066 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NcanP55066 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NcanP55066 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.81■□□□□ 0.92
NcanP55066 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NcanP55066 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.81■□□□□ 0.92
NcanP55066 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NcanP55066 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NcanP55066 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NcanP55066 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NcanP55066 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NcanP55066 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NcanP55066 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NcanP55066 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NcanP55066 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NcanP55066 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.79■□□□□ 0.92
NcanP55066 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.79■□□□□ 0.92
NcanP55066 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.79■□□□□ 0.92
NcanP55066 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NcanP55066 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Gm9987-201ENSMUST00000069768 567 ntBASIC20.79■□□□□ 0.92
NcanP55066 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NcanP55066 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.78■□□□□ 0.92
NcanP55066 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.78■□□□□ 0.92
NcanP55066 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NcanP55066 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NcanP55066 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NcanP55066 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.78■□□□□ 0.92
NcanP55066 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NcanP55066 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NcanP55066 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NcanP55066 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NcanP55066 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NcanP55066 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NcanP55066 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NcanP55066 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.76■□□□□ 0.91
NcanP55066 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NcanP55066 Gm7367-201ENSMUST00000057611 492 ntBASIC20.76■□□□□ 0.91
NcanP55066 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NcanP55066 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.75■□□□□ 0.91
NcanP55066 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NcanP55066 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NcanP55066 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.75■□□□□ 0.91
NcanP55066 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NcanP55066 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NcanP55066 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.75■□□□□ 0.91
NcanP55066 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
NcanP55066 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NcanP55066 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NcanP55066 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NcanP55066 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.74■□□□□ 0.91
NcanP55066 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NcanP55066 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NcanP55066 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NcanP55066 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NcanP55066 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
NcanP55066 Gm37055-201ENSMUST00000191866 133 ntBASIC20.73■□□□□ 0.91
NcanP55066 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.73■□□□□ 0.91
NcanP55066 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.73■□□□□ 0.91
NcanP55066 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms