Protein–RNA interactions for Protein: P54761

Ephb4, Ephrin type-B receptor 4, mousemouse

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb4P54761 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ephb4P54761 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ephb4P54761 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ephb4P54761 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.61■■□□□ 1.05
Ephb4P54761 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ephb4P54761 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ephb4P54761 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.6■■□□□ 1.05
Ephb4P54761 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ephb4P54761 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.6■■□□□ 1.05
Ephb4P54761 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ephb4P54761 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ephb4P54761 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.59■■□□□ 1.05
Ephb4P54761 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.59■■□□□ 1.05
Ephb4P54761 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ephb4P54761 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ephb4P54761 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ephb4P54761 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ephb4P54761 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ephb4P54761 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ephb4P54761 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ephb4P54761 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ephb4P54761 Gm12527-201ENSMUST00000117967 564 ntBASIC21.58■■□□□ 1.05
Ephb4P54761 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ephb4P54761 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.58■■□□□ 1.05
Ephb4P54761 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ephb4P54761 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ephb4P54761 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ephb4P54761 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ephb4P54761 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ephb4P54761 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ephb4P54761 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ephb4P54761 Mir5133-201ENSMUST00000174955 77 ntBASIC21.57■■□□□ 1.04
Ephb4P54761 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.57■■□□□ 1.04
Ephb4P54761 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ephb4P54761 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Ephb4P54761 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ephb4P54761 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ephb4P54761 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ephb4P54761 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.56■■□□□ 1.04
Ephb4P54761 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ephb4P54761 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ephb4P54761 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ephb4P54761 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.56■■□□□ 1.04
Ephb4P54761 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.56■■□□□ 1.04
Ephb4P54761 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ephb4P54761 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ephb4P54761 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ephb4P54761 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Ephb4P54761 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.55■■□□□ 1.04
Ephb4P54761 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.55■■□□□ 1.04
Ephb4P54761 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ephb4P54761 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ephb4P54761 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ephb4P54761 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.54■■□□□ 1.04
Ephb4P54761 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ephb4P54761 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.54■■□□□ 1.04
Ephb4P54761 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ephb4P54761 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ephb4P54761 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ephb4P54761 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ephb4P54761 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.53■■□□□ 1.04
Ephb4P54761 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ephb4P54761 Gm20760-201ENSMUST00000179197 648 ntBASIC21.53■■□□□ 1.04
Ephb4P54761 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ephb4P54761 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ephb4P54761 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ephb4P54761 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ephb4P54761 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ephb4P54761 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Ephb4P54761 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ephb4P54761 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms