Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek1P51954 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek1P51954 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Nek1P51954 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek1P51954 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek1P51954 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek1P51954 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Nek1P51954 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.66■■□□□ 1.06
Nek1P51954 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.66■■□□□ 1.06
Nek1P51954 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek1P51954 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek1P51954 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.65■■□□□ 1.06
Nek1P51954 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.65■■□□□ 1.06
Nek1P51954 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek1P51954 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.64■■□□□ 1.06
Nek1P51954 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nek1P51954 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.64■■□□□ 1.05
Nek1P51954 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nek1P51954 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek1P51954 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.63■■□□□ 1.05
Nek1P51954 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Nek1P51954 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nek1P51954 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek1P51954 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Nek1P51954 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek1P51954 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.62■■□□□ 1.05
Nek1P51954 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek1P51954 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.62■■□□□ 1.05
Nek1P51954 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nek1P51954 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Nek1P51954 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nek1P51954 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek1P51954 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek1P51954 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek1P51954 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek1P51954 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek1P51954 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.6■■□□□ 1.05
Nek1P51954 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.6■■□□□ 1.05
Nek1P51954 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nek1P51954 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Nek1P51954 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.59■■□□□ 1.05
Nek1P51954 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 AA386476-201ENSMUST00000098781 1665 ntBASIC21.59■■□□□ 1.05
Nek1P51954 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nek1P51954 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nek1P51954 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nek1P51954 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nek1P51954 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nek1P51954 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nek1P51954 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.58■■□□□ 1.05
Nek1P51954 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
Nek1P51954 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
Nek1P51954 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Nek1P51954 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.58■■□□□ 1.05
Nek1P51954 Gm8495-201ENSMUST00000188740 694 ntBASIC21.58■■□□□ 1.05
Nek1P51954 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nek1P51954 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.58■■□□□ 1.04
Nek1P51954 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Nek1P51954 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nek1P51954 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nek1P51954 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nek1P51954 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nek1P51954 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms