Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.93■□□□□ 0.3
GdnfP48540 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
GdnfP48540 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.93■□□□□ 0.3
GdnfP48540 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GdnfP48540 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GdnfP48540 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GdnfP48540 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.93■□□□□ 0.3
GdnfP48540 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GdnfP48540 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GdnfP48540 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GdnfP48540 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GdnfP48540 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.91■□□□□ 0.3
GdnfP48540 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GdnfP48540 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.91■□□□□ 0.3
GdnfP48540 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GdnfP48540 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GdnfP48540 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
GdnfP48540 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.9■□□□□ 0.3
GdnfP48540 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.9■□□□□ 0.3
GdnfP48540 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GdnfP48540 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.89■□□□□ 0.29
GdnfP48540 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 Gm7143-201ENSMUST00000222811 859 ntBASIC16.89■□□□□ 0.29
GdnfP48540 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GdnfP48540 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GdnfP48540 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.88■□□□□ 0.29
GdnfP48540 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.88■□□□□ 0.29
GdnfP48540 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GdnfP48540 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.87■□□□□ 0.29
GdnfP48540 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
GdnfP48540 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
GdnfP48540 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.87■□□□□ 0.29
GdnfP48540 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
GdnfP48540 Gm9870-201ENSMUST00000063874 645 ntBASIC16.87■□□□□ 0.29
GdnfP48540 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.87■□□□□ 0.29
GdnfP48540 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GdnfP48540 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GdnfP48540 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.87■□□□□ 0.29
GdnfP48540 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms