Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa2P35583 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.34■□□□□ 0.21
Foxa2P35583 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Foxa2P35583 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxa2P35583 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxa2P35583 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Foxa2P35583 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Foxa2P35583 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Foxa2P35583 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa2P35583 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Foxa2P35583 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.32■□□□□ 0.2
Foxa2P35583 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.32■□□□□ 0.2
Foxa2P35583 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Foxa2P35583 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxa2P35583 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa2P35583 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa2P35583 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Foxa2P35583 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.31■□□□□ 0.2
Foxa2P35583 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa2P35583 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.31■□□□□ 0.2
Foxa2P35583 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa2P35583 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Foxa2P35583 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxa2P35583 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.3■□□□□ 0.2
Foxa2P35583 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.3■□□□□ 0.2
Foxa2P35583 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.3■□□□□ 0.2
Foxa2P35583 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxa2P35583 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Foxa2P35583 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Foxa2P35583 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Foxa2P35583 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxa2P35583 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Foxa2P35583 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Foxa2P35583 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Foxa2P35583 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.28■□□□□ 0.2
Foxa2P35583 Gm9847-201ENSMUST00000052528 599 ntBASIC16.28■□□□□ 0.2
Foxa2P35583 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.28■□□□□ 0.2
Foxa2P35583 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa2P35583 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Foxa2P35583 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.27■□□□□ 0.2
Foxa2P35583 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Foxa2P35583 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.27■□□□□ 0.2
Foxa2P35583 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa2P35583 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa2P35583 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa2P35583 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms