Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Slc6a1P31648 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.68■□□□□ 0.26
Slc6a1P31648 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a1P31648 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a1P31648 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.68■□□□□ 0.26
Slc6a1P31648 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a1P31648 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc6a1P31648 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a1P31648 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc6a1P31648 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a1P31648 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a1P31648 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc6a1P31648 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.66■□□□□ 0.26
Slc6a1P31648 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Slc6a1P31648 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a1P31648 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Slc6a1P31648 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a1P31648 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a1P31648 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a1P31648 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a1P31648 BC021767-201ENSMUST00000126387 1716 ntBASIC16.65■□□□□ 0.26
Slc6a1P31648 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a1P31648 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.64■□□□□ 0.25
Slc6a1P31648 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.64■□□□□ 0.25
Slc6a1P31648 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a1P31648 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a1P31648 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc6a1P31648 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Gm45102-201ENSMUST00000207427 857 ntBASIC16.63■□□□□ 0.25
Slc6a1P31648 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.63■□□□□ 0.25
Slc6a1P31648 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Slc6a1P31648 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc6a1P31648 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc6a1P31648 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a1P31648 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.62■□□□□ 0.25
Slc6a1P31648 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.62■□□□□ 0.25
Slc6a1P31648 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc6a1P31648 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a1P31648 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Slc6a1P31648 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms